Here is a list of all class members with links to the classes they belong to:
- F
: BALL::Element
, BALL::Constant
- f
: BALL::CharmmTorsion::SingleCharmmTorsion
, BALL::CosineTorsion::SingleValues
, BALL::AmberTorsion::SingleAmberTorsion
- F2E_CENTER_DISTANCE_LOWER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- f2e_center_distance_lower_
: BALL::AromaticRingStacking
- F2E_CENTER_DISTANCE_UPPER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- f2e_center_distance_upper_
: BALL::AromaticRingStacking
- f2f_lateral_displacemant_lower_
: BALL::AromaticRingStacking
- f2f_lateral_displacemant_upper_
: BALL::AromaticRingStacking
- F2F_LATERAL_DISPLACEMENT_LOWER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- F2F_LATERAL_DISPLACEMENT_UPPER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- F2F_PLANE_DISTANCE_LOWER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- f2f_plane_distance_lower_
: BALL::AromaticRingStacking
- F2F_PLANE_DISTANCE_UPPER
: BALL::AromaticRingStacking::Option
, BALL::AromaticRingStacking::Default
- f2f_plane_distance_upper_
: BALL::AromaticRingStacking
- f_GB_()
: BALL::GeneralizedBornModel
- face_
: BALL::GraphEdge< Vertex, Edge, Face >
- faceExists()
: BALL::RSComputer
- FaceIterator
: BALL::GraphVertex< Vertex, Edge, Face >
- faces_
: BALL::GraphVertex< Vertex, Edge, Face >
, BALL::ReducedSurface
, BALL::SolventAccessibleSurface
- factor1
: BALL::MicroCanonicalMD::AuxFactors
, BALL::CanonicalMD::AuxFactors
- factor2
: BALL::CanonicalMD::AuxFactors
, BALL::MicroCanonicalMD::AuxFactors
- factor_
: BALL::GAMESSLogFile
, BALL::BuriedPolar
, BALL::HydrogenBond
, BALL::ChemScoreMetal
, BALL::NonpolarSolvation
- FakeDriver()
: BALL::VIEW::FakeDriver
- far_
: BALL::VIEW::GLRenderer
- FARADAY
: BALL::Constant
- FastAtom
: BALL::FDPB
- FB_INTERNAL_TEXTURE_FORMAT
: BALL::VIEW::GLRenderWindow
- FB_TEXTURE_DATATYPE
: BALL::VIEW::GLRenderWindow
- FB_TEXTURE_FORMAT
: BALL::VIEW::GLRenderWindow
- FB_TEXTURE_TARGET
: BALL::VIEW::GLRenderWindow
- FDPB()
: BALL::FDPB
- fdpb_
: BALL::PolarSolvation
, BALL::VIEW::FDPBDialog
- fdpb_dialog_
: BALL::VIEW::MolecularStructure
- FDPBDialog()
: BALL::VIEW::FDPBDialog
- Fe
: BALL::Element
- feature_number
: BALL::GAFFCESParser::APSMatcher::APSTerm
, BALL::GAFFCESParser::State
- FermiBaseFunction()
: BALL::FermiBaseFunction
- FERMIUM
: BALL::Element
- FERRUM
: BALL::Element
- FetchHTMLThread()
: BALL::VIEW::FetchHTMLThread
- fetchPreferences()
: BALL::VIEW::DockDialog
, BALL::VIEW::DownloadPDBFile
, BALL::VIEW::GeometricFitDialog
, BALL::VIEW::LabelDialog
, BALL::VIEW::Preferences
, BALL::VIEW::MainControl
, BALL::VIEW::ModularWidget
, BALL::VIEW::DockingController
, BALL::VIEW::DockWidget
, BALL::VIEW::MolecularControl
, BALL::VIEW::MolecularStructure
, BALL::VIEW::PyWidget
, BALL::VIEW::Scene
- fetchPreferences_()
: BALL::VIEW::DockDialog
, BALL::VIEW::GeometricFitDialog
- ff_
: BALL::DNAMutator
, BALL::ForceFieldEvaluation
- FF_BASED
: BALL::HybridisationProcessor::Method
- FFT_grid_a_
: BALL::GeometricFit
- FFT_grid_b_
: BALL::GeometricFit
- FFT_grid_lower_coord_
: BALL::GeometricFit
- FFT_grid_lower_index_
: BALL::GeometricFit
- FFT_grid_origin_
: BALL::GeometricFit
- FFT_grid_size_index_
: BALL::GeometricFit
- FFT_grid_upper_coord_
: BALL::GeometricFit
- FFT_grid_upper_index_
: BALL::GeometricFit
- FFTGridMulti_()
: BALL::GeometricFit
- FftwPlan
: BALL::DoubleTraits
, BALL::FloatTraits
, BALL::LongDoubleTraits
- field_line_errors_
: BALL::VIEW::FieldLineCreator
- FieldLineCreator()
: BALL::VIEW::FieldLineCreator
- FieldLinesDialog()
: BALL::VIEW::FieldLinesDialog
- fields_
: BALL::AtomTyper
- FiguerasAlgorithm_()
: BALL::RingPerceptionProcessor
- FILE
: BALL::VIEW::MainControl
- File()
: BALL::File
- file_
: BALL::Exception::GeneralException
, BALL::Exception::GlobalExceptionHandler
- file_address_
: BALL::TCPTransfer
- FILE_EXPORT
: BALL::VIEW::MainControl
- file_format_
: BALL::VIEW::MolecularFileDialog
- file_formats_
: BALL::VIEW::DatasetController
- FILE_IMPORT
: BALL::VIEW::MainControl
- FILE_MONITOR
: BALL::VIEW::MainControl
- file_name_
: BALL::VIEW::FetchHTMLThread
, BALL::VIEW::FileObserver
- FILE_OPEN
: BALL::VIEW::MainControl
- FILE_OPEN_GRID
: BALL::VIEW::MainControl
- FileFormats
: BALL::VIEW::MolecularFileDialog
- FILENAME
: BALL::AmberFF::Option
, BALL::AmberFF::Default
, BALL::CharmmFF::Option
, BALL::CharmmFF::Default
, BALL::GeneralizedBornModel::Option
, BALL::GeneralizedBornModel::Default
- filename_
: BALL::CharmmFF
, BALL::AssignRadiusProcessor
, BALL::FragmentDB::NoFragmentNode
, BALL::FragmentDB
, BALL::File::CannotWrite
, BALL::VIEW::ExportGeometryDialog
, BALL::VIEW::GLOffscreenTarget
, BALL::VIEW::TestFramework
, BALL::Exception::FileNotFound
, BALL::INIFile
, BALL::PDBInfo
, BALL::AmberFF
- FileNotFound()
: BALL::Exception::FileNotFound
- FILENOTFOUND__ERROR
: BALL::TCPTransfer
- FileObserver()
: BALL::VIEW::FileObserver
- fileSelected()
: BALL::VIEW::PythonSettings
- fill()
: BALL::BitVector
- fillDialog()
: BALL::VIEW::DockProgressDialog
- filled_
: BALL::VIEW::MeshBuffer
- fillRecord()
: BALL::PDBFile
- fillSystemComboboxes_()
: BALL::VIEW::DockDialog
- filterLines()
: BALL::LogStream
- final_height_
: BALL::VIEW::TilingRenderer
- final_width_
: BALL::VIEW::TilingRenderer
- finalize()
: BALL::PersistentObject
, BALL::Bond
, BALL::PyInterpreter
- finalizeInputStream()
: BALL::PersistenceManager
, BALL::XDRPersistenceManager
- finalizeOutputStream()
: BALL::PersistenceManager
, BALL::XDRPersistenceManager
- finalizePreferencesTab()
: BALL::VIEW::DisplayProperties
, BALL::VIEW::ModularWidget
, BALL::VIEW::ServerWidget
, BALL::VIEW::EditableScene
, BALL::VIEW::PyWidget
, BALL::VIEW::Scene
- finalizeWidget()
: BALL::VIEW::PluginDialog
, BALL::VIEW::ModularWidget
, BALL::VIEW::ServerWidget
, BALL::VIEW::EditFunctions
, BALL::VIEW::LogView
, BALL::VIEW::PyWidget
- find()
: BALL::HashGridBox3< Item >
, BALL::HashSet< Key >
, BALL::RegularExpression
, BALL::Directory
, BALL::Path
- find_()
: BALL::ConnectedToPredicate
- findAllBCC()
: BALL::RingPerceptionProcessor
- findAllBCC_()
: BALL::RingPerceptionProcessor
- findChainAreas()
: BALL::ChainBuilder
- findChains()
: BALL::ChainBuilder
- findChild()
: BALL::ResourceEntry
- findConnollySurfacePoints_()
: BALL::GeometricFit
- findDescendant()
: BALL::ResourceEntry
- findEdge()
: BALL::RSComputer
- findEdges()
: BALL::ChainBuilder
- findEnabledFirstTarget()
: BALL::NotificationManager_
- findEnabledSource()
: BALL::NotificationManager_
- findEnabledTarget()
: BALL::NotificationManager_
- findEntry()
: BALL::ResourceEntry
- findError_()
: BALL::VIEW::PyWidget
- findFace()
: BALL::RSComputer
- findFirstAtom()
: BALL::RSComputer
- findFirstEdge()
: BALL::RSComputer
- findFirstFace()
: BALL::RSComputer
- findFirstTarget()
: BALL::NotificationManager_
- findFirstVertex()
: BALL::RSComputer
- findFTDockInsidePoints_()
: BALL::GeometricFit
- findFTDockSurfacePoints_()
: BALL::GeometricFit
- findGreaterOrEqual_()
: BALL::ResourceEntry
- findInsidePoints_()
: BALL::GeometricFit
- findKey_()
: BALL::VIEW::PyWidget
- findNextPosition()
: BALL::Composite::CompositeIteratorTraits
- findPath()
: BALL::ChainBuilder
- findPreviousPosition()
: BALL::Composite::CompositeIteratorTraits
- findSecondAtom()
: BALL::RSComputer
- findSimilarEdges()
: BALL::ReducedSurface
- findSimilarVertices()
: BALL::ReducedSurface
- findSource()
: BALL::NotificationManager_
- findStep()
: BALL::ConjugateGradientMinimizer
, BALL::EnergyMinimizer
, BALL::ShiftedLVMMMinimizer
, BALL::SteepestDescentMinimizer
, BALL::StrangLBFGSMinimizer
- findStream_()
: BALL::LogStream
- findStrict()
: BALL::Path
- findTarget()
: BALL::NotificationManager_
- findThirdAtom()
: BALL::RSComputer
- findTransformation()
: BALL::TransformationManager
- findTriangle_()
: BALL::SESFace
- findVanDerWaalsSurfacePoints_()
: BALL::GeometricFit
- FINE_STRUCTURE_CONSTANT
: BALL::Constant
- finePenalty()
: BALL::AssignBondOrderProcessor::PQ_Entry_
- finish()
: BALL::ShiftModel
, BALL::EFShiftProcessor
, BALL::ComposedEnergyProcessor
, BALL::UnaryProcessor< T >
, BALL::BinaryProcessor< T1, T2 >
, BALL::RuleProcessor
, BALL::MMFF94ChargeProcessor
, BALL::AnisotropyShiftProcessor
, BALL::HaighMallionShiftProcessor
, BALL::HBondShiftProcessor
, BALL::JohnsonBoveyShiftProcessor
, BALL::ShiftModule
, BALL::Pair6_12InteractionEnergyProcessor
, BALL::PairExpInteractionEnergyProcessor
, BALL::PCMCavFreeEnergyProcessor
, BALL::PierottiCavFreeEnergyProcessor
, BALL::ReissCavFreeEnergyProcessor
, BALL::UhligCavFreeEnergyProcessor
, BALL::BindingPocketProcessor
, BALL::AssignRadiusProcessor
, BALL::FragmentDB::NormalizeNamesProcessor
, BALL::BoundingBoxProcessor
, BALL::GeometricCenterProcessor
, BALL::FragmentDistanceCollector
, BALL::ReconstructFragmentProcessor
, BALL::ResidueChecker
, BALL::SurfaceProcessor
, BALL::VIEW::AtomDistanceColorProcessor
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
, BALL::AssignBondOrderProcessor
, BALL::VIEW::TilingRenderer
, BALL::HBondProcessor
, BALL::FragmentDB::BuildBondsProcessor
- finish_()
: BALL::VIEW::MolecularFileDialog
, BALL::VIEW::SimulationThread
- finished()
: BALL::VIEW::PubChemDialog
, BALL::VIEW::AssignBondOrderResultsDialog
- finished_
: BALL::ConnectedToPredicate::CTPNode
- FINISHED_UPDATE
: BALL::VIEW::RepresentationMessage
- finishedRendering()
: BALL::VIEW::RepresentationManager
- FinishedSimulationMessage()
: BALL::VIEW::FinishedSimulationMessage
- finishedUpdate_()
: BALL::VIEW::RepresentationManager
- finishIteration()
: BALL::EnergyMinimizer
- first
: BALL::Quadruple< T1, T2, T3, T4 >
, BALL::Triple< T1, T2, T3 >
- first_
: BALL::NotificationSource_
, BALL::NotificationSlot_
, BALL::Addition< First, Second, DataType >
, BALL::Subtraction< First, Second, DataType >
, BALL::Product< First, Second, DataType >
, BALL::SmartsParser::SPEdge
, BALL::Bond
, BALL::Division< First, Second, DataType >
- first_argument_pointer
: BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
- first_argument_reference
: BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
- first_argument_type
: BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
- first_atom
: BALL::MOLFile::BondStruct
, BALL::PDB::RecordLINK
, BALL::PDB::RecordSLTBRG
- first_atom_
: BALL::RingFinder
- first_atom_expressions_
: BALL::EFShiftProcessor
- first_child_
: BALL::Composite
- first_color_
: BALL::VIEW::ResidueNumberColorProcessor
- first_edge_
: BALL::SmartsParser::SPNode
, BALL::SmartsParser::SPEdge
- first_guide_point
: BALL::VIEW::AddBackboneModel::ModelPart
- first_item_
: BALL::HashGridBox3< Item >
- first_iter_
: BALL::ShiftedLVMMMinimizer
, BALL::StrangLBFGSMinimizer
, BALL::ConjugateGradientMinimizer
- first_matches
: BALL::SmartsMatcher::RecStructCore_
, BALL::SmartsMatcher::RecStruct_
- first_non_hydrogen_atom
: BALL::PDB::RecordHYDBND
- first_point
: BALL::VIEW::AddBackboneModel::ModelPart
- FIRSTNEIGHBOUR
: BALL::SDGenerator
- firstResidueColorPressed()
: BALL::VIEW::ColoringSettingsDialog
- firstSESEdge()
: BALL::SESTriangulator
- firstSnapshotClicked()
: BALL::VIEW::SnapshotVisualisationDialog
- fiveturn_
: BALL::SecondaryStructureProcessor
- fixAromaticRings_()
: BALL::Kekuliser
- fixAromaticSystem_()
: BALL::Kekuliser
- fixed_val_
: BALL::AssignBondOrderProcessor
- flags
: BALL::VIEW::PixelFormat
, BALL::VIEW::ShortcutTableModel
- FLETCHER_REEVES
: BALL::ConjugateGradientMinimizer
- flip()
: BALL::VIEW::ClippingPlane
- flipClippingCapping()
: BALL::VIEW::GeometricControl
- flipClippingPlane()
: BALL::VIEW::GeometricControl
- FLOAT
: BALL::NamedProperty
- FLOAT_CHANNEL
: BALL::VIEW::ChannelFormat
- FLUORINE
: BALL::Element
- flush()
: BALL::LogStream
- FLUSH_TO_DISK_FREQUENCY
: BALL::SnapShotManager::Default
, BALL::SnapShotManager::Option
- flush_to_disk_frequency_
: BALL::SnapShotManager
- flushToDisk()
: BALL::SnapShotManager
, BALL::TrajectoryFile
, BALL::DCDFile
, BALL::TRRFile
- Fm
: BALL::Element
- focal_distance_
: BALL::VIEW::Stage
- focalDistanceChanged()
: BALL::VIEW::StageSettings
- focus()
: BALL::VIEW::GeometricControl
- focusAtom()
: BALL::VIEW::BondProperties
- FOCUSING
: BALL::FDPB::Boundary
- focusPartner()
: BALL::VIEW::BondProperties
- focusRepresentation()
: BALL::VIEW::RepresentationManager
- fog_intensity_
: BALL::VIEW::Stage
- fogBoxChanged()
: BALL::VIEW::StageSettings
- FOLDER
: BALL::MMFF94::Default
, BALL::MMFF94::Option
- folder_
: BALL::MMFF94
- font_
: BALL::VIEW::LabelDialog
, BALL::VIEW::PythonSettings
, BALL::VIEW::Label
, BALL::VIEW::LabelModel
, BALL::VIEW::MainControlPreferences
- font_file_
: BALL::VIEW::POVRenderer
- font_size_
: BALL::VIEW::Scene
- fontSelected()
: BALL::VIEW::LabelDialog
- footer_()
: BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
- force
: BALL::Atom::StaticAtomAttributes
- force_data_size
: BALL::TRRFile::TRRHeader
- force_field_
: BALL::EnergyMinimizer
, BALL::PeriodicBoundary
, BALL::ForceFieldComponent
- force_field_id_
: BALL::VIEW::MolecularStructure
- force_field_ptr_
: BALL::MolecularDynamics
, BALL::SnapShotManager
- force_update_counter_
: BALL::EnergyMinimizer
- forceBaseChanged()
: BALL::VIEW::ModelSettingsDialog
- ForceColorProcessor()
: BALL::VIEW::ForceColorProcessor
- ForceField
: BALL::ForceFieldComponent
, BALL::ForceFieldParameters
, BALL::ForceField
- ForceFieldComponent()
: BALL::ForceFieldComponent
, BALL::ForceField
, BALL::ForceFieldComponent
- ForceFieldEvaluation()
: BALL::ForceFieldEvaluation
- ForceFieldParameters()
: BALL::ForceFieldParameters
- forceMaxColorPressed()
: BALL::VIEW::ColoringSettingsDialog
- forceMaxLengthChanged()
: BALL::VIEW::ModelSettingsDialog
- forceMaxValueChanged()
: BALL::VIEW::ColoringSettingsDialog
- forceMinColorPressed()
: BALL::VIEW::ColoringSettingsDialog
- forceMinValueChanged()
: BALL::VIEW::ColoringSettingsDialog
- ForceModel()
: BALL::VIEW::ForceModel
- forceOffsetChanged()
: BALL::VIEW::ModelSettingsDialog
- forceScalingChanged()
: BALL::VIEW::ModelSettingsDialog
- Form
: BALL::TLine3< T >
- FORM__PARAMETER
: BALL::TLine3< T >
- FORM__TWO_POINTS
: BALL::TLine3< T >
- formal_charge
: BALL::Atom::StaticAtomAttributes
- formal_charge_
: BALL::SmilesParser::SPAtom
- FormalCharge()
: BALL::FormalCharge
- format
: BALL::VIEW::FrameBuffer
- format_
: BALL::Exception::InvalidFormat
, BALL::LennardJones
- format_line_
: BALL::ParameterSection
- format_string
: BALL::PDB::RecordTypeFormat
- FormatType
: BALL::LennardJones
- FormatUnsupported()
: BALL::Exception::FormatUnsupported
- formatUpdated()
: BALL::VIEW::BufferedRenderer
- formula_
: BALL::UCK
- forward()
: BALL::Composite::ChildCompositeIteratorTraits
, BALL::Composite::AncestorIteratorTraits
, BALL::Composite::CompositeIteratorTraits
, BALL::HashGrid3< Item >::BoxIteratorTraits
, BALL::HashGridBox3< Item >::DataIteratorTraits
, BALL::VIEW::SnapshotVisualisationDialog
, BALL::HashGridBox3< Item >::BoxIteratorTraits
, BALL::ResourceEntry::IteratorTraits_
, BALL::Atom::BondIteratorTraits
, BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_
, BALL::CompositeIteratorTraits
, BALL::HashSet< Key >::IteratorTraits
- forward_
: BALL::VIEW::MyTextBrowser
- forwarded_rings_
: BALL::RingPerceptionProcessor
- ForwardIterator()
: BALL::ForwardIterator< Container, DataType, Position, Traits >
- FOUND
: BALL::SDGenerator
- found_new_
: BALL::BindingPocketProcessor
- fourth
: BALL::Quadruple< T1, T2, T3, T4 >
- fourturn_
: BALL::SecondaryStructureProcessor
- fps_
: BALL::VIEW::Scene
- Fr
: BALL::Element
- frag_db_
: BALL::ElectrostaticPotentialCalculator
- Fragment()
: BALL::Fragment
- fragment_
: BALL::EnergyProcessor
, BALL::NumericalSAS
- fragment_db_
: BALL::FragmentDB::BuildBondsProcessor
, BALL::FragmentDB::NormalizeNamesProcessor
, BALL::VIEW::MainControl
, BALL::Peptides::PeptideBuilder
, BALL::AssignShiftProcessor
, BALL::ReconstructFragmentProcessor
, BALL::ResidueChecker
, BALL::RotamerLibrary
, BALL::VIEW::EditableScene
- fragment_db_initialized_
: BALL::VIEW::EditableScene
- fragment_list_
: BALL::FragmentDB::BuildBondsProcessor
- FragmentDB()
: BALL::FragmentDB
- FragmentDB::AddHydrogensProcessor
: BALL::FragmentDB
- FragmentDistanceCollector()
: BALL::FragmentDistanceCollector
- FragmentIteratorTraits()
: BALL::FragmentIteratorTraits
- fragments
: BALL::FragmentDistanceCollector
- fragments_
: BALL::FragmentDB::NormalizeNamesProcessor
, BALL::FragmentDB
- FragmentTypes
: BALL::FragmentDB
- FrameBuffer()
: BALL::VIEW::FrameBuffer
- FrameBufferFormat()
: BALL::VIEW::FrameBufferFormat
- FRANCIUM
: BALL::Element
- free_bonds_
: BALL::AssignBondOrderProcessor
- free_list_
: BALL::SmartsMatcher::RecStructPool_
, BALL::Atom
- freeDB_()
: BALL::DNAMutator
- freeFF_()
: BALL::DNAMutator
- freeIndex_()
: BALL::Atom
- fresno_types
: BALL::HydrogenBond
- fresno_types_
: BALL::RotationalEntropyLoss
- FresnoType
: BALL::FresnoTypes
- FresnoTypes()
: BALL::FresnoTypes
- from()
: BALL::String
- from_
: BALL::Substring
- fromAxisAngle()
: BALL::TQuaternion< T >
- fromEulerAngles()
: BALL::TQuaternion< T >
- front()
: BALL::PDBRecords
- frozenBondsDFS_()
: BALL::RotationalEntropyLoss
- fstream_
: BALL::TCPTransfer
- FTDOCK
: BALL::GeometricFit
- FTP_PROTOCOL
: BALL::TCPTransfer
- full_distance_color_
: BALL::VIEW::AtomDistanceColorProcessor
- full_silent_
: BALL::VIEW::PyWidget
- FullNameType
: BALL::Atom
, BALL::Residue
- fullscreen_
: BALL::VIEW::MainControl
- fullscreen_action_
: BALL::VIEW::Scene
- function_
: BALL::MutablePower< Function, DataType >
, BALL::SquareFunction< Function, DataType >
, BALL::Reciprocal< Function, DataType >
, BALL::NumericalIntegrator< Function, DataType >
, BALL::CubicFunction< Function, DataType >
- functions_
: BALL::ParsedFunction< arg >
- FUSED
: BALL::RingAnalyser
- FXAS
: BALL::SDGenerator