public class Confidence extends java.lang.Object implements PhylogenyData, java.lang.Comparable<Confidence>
Modifier and Type | Field and Description |
---|---|
static double |
CONFIDENCE_DEFAULT_VALUE |
Constructor and Description |
---|
Confidence() |
Confidence(double value,
java.lang.String type) |
Modifier and Type | Method and Description |
---|---|
java.lang.StringBuffer |
asSimpleText() |
java.lang.StringBuffer |
asText() |
int |
compareTo(Confidence confidence) |
PhylogenyData |
copy()
Creates a new PhylogenyData object with identical values as this
PhylogenyData.
|
java.lang.String |
getType() |
double |
getValue() |
void |
init() |
boolean |
isEqual(PhylogenyData confidence)
Compares this PhylogenyData to PhylogenyData data.
|
void |
setType(java.lang.String type) |
void |
setValue(double value) |
java.lang.StringBuffer |
toNHX() |
void |
toPhyloXML(java.io.Writer writer,
int level,
java.lang.String indentation)
Writes a phyloXML representation of this phylogeny data.
|
java.lang.String |
toString() |
public static final double CONFIDENCE_DEFAULT_VALUE
public Confidence()
public Confidence(double value, java.lang.String type)
public java.lang.StringBuffer asSimpleText()
asSimpleText
in interface PhylogenyData
public java.lang.StringBuffer asText()
asText
in interface PhylogenyData
public int compareTo(Confidence confidence)
compareTo
in interface java.lang.Comparable<Confidence>
public PhylogenyData copy()
PhylogenyData
copy
in interface PhylogenyData
public java.lang.String getType()
public double getValue()
public void init()
public boolean isEqual(PhylogenyData confidence)
PhylogenyData
isEqual
in interface PhylogenyData
public void setType(java.lang.String type)
public void setValue(double value)
public java.lang.StringBuffer toNHX()
toNHX
in interface PhylogenyData
public void toPhyloXML(java.io.Writer writer, int level, java.lang.String indentation) throws java.io.IOException
PhylogenyData
toPhyloXML
in interface PhylogenyData
java.io.IOException
public java.lang.String toString()
toString
in class java.lang.Object