seqhap.dat {haplo.stats} | R Documentation |
Simulated data for seqhap examples
Description
Simulated data set for the demonstration of seqhap functionality.
Contains one column for disease status and columns representing 10 SNP
loci with a known association. seqhap.pos contains a column for
chromosome position, as required by seqhap.
Usage
data(seqhap.dat)
data(seqhap.pos)
Format
A data frame with 1000 observations on the following 21 variables.
disease
- numeric, indicator of disease status 0=no, 1=yes
m1.1
- first allele of genotype
m1.2
- second allele of genotype
m2.1
- first allele of genotype
m2.2
- second allele of genotype
m3.1
- first allele of genotype
m3.2
- second allele of genotype
m4.1
- first allele of genotype
m4.2
- second allele of genotype
m5.1
- first allele of genotype
m5.2
- second allele of genotype
m6.1
- first allele of genotype
m6.2
- second allele of genotype
m7.1
- first allele of genotype
m7.2
- second allele of genotype
m8.1
- first allele of genotype
m8.2
- second allele of genotype
m9.1
- first allele of genotype
m9.2
- second allele of genotype
m10.1
- first allele of genotype
m10.2
- second allele of genotype
References
Yu Z, Schaid DJ (2007) Sequantial haplotype scan methods for
association analysis. Gen Epi, in print.
Examples
data(seqhap.dat)
[Package
haplo.stats version 1.4.4
Index]