This is the complete list of members for
BALL::GAFFTypeProcessor, including all inherited members.
annotateAliphaticAndAromaticRingAtoms_() | BALL::GAFFTypeProcessor | [protected] |
annotateBondTypes_() | BALL::GAFFTypeProcessor | [protected] |
annotatePlanarRingAtoms_() | BALL::GAFFTypeProcessor | [protected] |
annotateRingSizes_() | BALL::GAFFTypeProcessor | [protected] |
argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
assignAtomtype_(Atom &atom) | BALL::GAFFTypeProcessor | [protected] |
atom_types_ | BALL::GAFFTypeProcessor | [protected] |
ces_parsers_ | BALL::GAFFTypeProcessor | [protected] |
const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
current_molecule_ | BALL::GAFFTypeProcessor | [protected] |
finish() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
GAFFTypeProcessor() | BALL::GAFFTypeProcessor | |
GAFFTypeProcessor(const Options &new_options) | BALL::GAFFTypeProcessor | |
getCarbonTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
getHydrogenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
getNitrogenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
getOxygenTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
getSulfurTypes_() | BALL::GAFFTypeProcessor | [inline, protected] |
getTypeNames() const | BALL::GAFFTypeProcessor | |
operator()(Composite &composite) | BALL::GAFFTypeProcessor | [virtual] |
options | BALL::GAFFTypeProcessor | |
parseAtomtypeTableFile_() | BALL::GAFFTypeProcessor | [protected] |
planarAtom_(const Atom &atom) | BALL::GAFFTypeProcessor | [protected] |
postProcessAtomTypes_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
precomputeAtomProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
precomputeBondProperties_(Molecule *molecule) | BALL::GAFFTypeProcessor | [protected] |
result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
sssr_ | BALL::GAFFTypeProcessor | [protected] |
start() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline] |
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | [inline] |
~GAFFTypeProcessor() | BALL::GAFFTypeProcessor | [virtual] |
~UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline, virtual] |