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elastix::MultiResolutionRegistrationWithFeatures< TElastix > Class Template Reference

A registration framework based on the itk::MultiResolutionImageRegistrationMethodWithFeatures. More...

#include <elxMultiResolutionRegistrationWithFeatures.h>

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Public Types

typedef
Superclass2::ConfigurationPointer 
ConfigurationPointer
typedef
Superclass2::ConfigurationType 
ConfigurationType
typedef SmartPointer< const SelfConstPointer
typedef Superclass2::ElastixPointer ElastixPointer
typedef Superclass2::ElastixType ElastixType
typedef
Superclass1::FixedImageConstPointer 
FixedImageConstPointer
typedef
Superclass1::FixedImagePyramidPointer 
FixedImagePyramidPointer
typedef
Superclass1::FixedImagePyramidType 
FixedImagePyramidType
typedef
Superclass1::FixedImageRegionType 
FixedImageRegionType
typedef Superclass1::FixedImageType FixedImageType
typedef
Superclass1::InterpolatorPointer 
InterpolatorPointer
typedef
Superclass1::InterpolatorType 
InterpolatorType
typedef Superclass2::ITKBaseType ITKBaseType
typedef Superclass1::MetricPointer MetricPointer
typedef Superclass1::MetricType MetricType
typedef
Superclass1::MovingImageConstPointer 
MovingImageConstPointer
typedef
Superclass1::MovingImagePyramidPointer 
MovingImagePyramidPointer
typedef
Superclass1::MovingImagePyramidType 
MovingImagePyramidType
typedef
Superclass1::MovingImageType 
MovingImageType
typedef
Superclass1::OptimizerPointer 
OptimizerPointer
typedef Superclass1::OptimizerType OptimizerType
typedef Superclass1::ParametersType ParametersType
typedef SmartPointer< SelfPointer
typedef
Superclass2::RegistrationPointer 
RegistrationPointer
typedef
Superclass2::RegistrationType 
RegistrationType
typedef
MultiResolutionRegistrationWithFeatures 
Self
typedef
MultiResolutionImageRegistrationMethodWithFeatures
< typename RegistrationBase
< TElastix >::FixedImageType,
typename RegistrationBase
< TElastix >::MovingImageType
Superclass1
typedef RegistrationBase
< TElastix > 
Superclass2
typedef
Superclass1::TransformPointer 
TransformPointer
typedef Superclass1::TransformType TransformType
typedef
Superclass2::UseMaskErosionArrayType 
UseMaskErosionArrayType

Public Member Functions

virtual void BeforeEachResolution (void)
virtual void BeforeRegistration (void)
 elxClassNameMacro ("MultiResolutionRegistrationWithFeatures")
virtual const char * GetClassName () const
 itkStaticConstMacro (FixedImageDimension, unsigned int, Superclass2::FixedImageDimension)
 itkStaticConstMacro (MovingImageDimension, unsigned int, Superclass2::MovingImageDimension)

Static Public Member Functions

static Pointer New ()

Protected Types

typedef
Superclass2::FixedMaskImagePointer 
FixedMaskImagePointer
typedef
Superclass2::FixedMaskImageType 
FixedMaskImageType
typedef
Superclass2::FixedMaskSpatialObjectPointer 
FixedMaskSpatialObjectPointer
typedef
Superclass2::FixedMaskSpatialObjectType 
FixedMaskSpatialObjectType
typedef Superclass2::MaskPixelType MaskPixelType
typedef
Superclass2::MovingMaskImagePointer 
MovingMaskImagePointer
typedef
Superclass2::MovingMaskImageType 
MovingMaskImageType
typedef
Superclass2::MovingMaskSpatialObjectPointer 
MovingMaskSpatialObjectPointer
typedef
Superclass2::MovingMaskSpatialObjectType 
MovingMaskSpatialObjectType
typedef TimerType::Pointer TimerPointer
typedef tmr::Timer TimerType

Protected Member Functions

virtual void GetAndSetComponents (void)
virtual void GetAndSetFixedImageInterpolators (void)
virtual void GetAndSetFixedImageRegions (void)
 MultiResolutionRegistrationWithFeatures ()
void UpdateFixedMasks (unsigned int level)
void UpdateMovingMasks (unsigned int level)
virtual ~MultiResolutionRegistrationWithFeatures ()

Private Member Functions

 MultiResolutionRegistrationWithFeatures (const Self &)
void operator= (const Self &)

Detailed Description

template<class TElastix>
class elastix::MultiResolutionRegistrationWithFeatures< TElastix >

A registration framework based on the itk::MultiResolutionImageRegistrationMethodWithFeatures.

This MultiResolutionRegistrationWithFeatures gives a framework for registration with a multi-resolution approach, using ... Like this for example:
(Interpolator "BSplineInterpolator" "BSplineInterpolator")

The parameters used in this class are:

Parameters:
Registration: Select this registration framework as follows:
(Registration "MultiResolutionRegistrationWithFeatures")
Parameters:
NumberOfResolutions: the number of resolutions used.
example: (NumberOfResolutions 4)
The default is 3.
Parameters:
Metric<i>Weight: The weight for the i-th metric, in each resolution
example: (Metric0Weight 0.5 0.5 0.8)
example: (Metric1Weight 0.5 0.5 0.2)
The default is 1.0.

Definition at line 52 of file elxMultiResolutionRegistrationWithFeatures.h.


Member Typedef Documentation

template<class TElastix >
typedef SmartPointer<const Self> elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ConstPointer

The CombinationMetric type, which is used internally by the Superclass1 Typedef's from Elastix.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 130 of file elxMultiResolutionRegistrationWithFeatures.h.

Type of the Fixed image multiresolution pyramid.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 113 of file elxMultiResolutionRegistrationWithFeatures.h.

Typedef's inherited from Superclass1. Type of the Fixed image.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 88 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
typedef Superclass2::MaskPixelType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MaskPixelType [protected]

Typedef's for mask support.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 172 of file elxMultiResolutionRegistrationWithFeatures.h.

Type of the moving image multiresolution pyramid.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 117 of file elxMultiResolutionRegistrationWithFeatures.h.

Type of the Moving image.

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 93 of file elxMultiResolutionRegistrationWithFeatures.h.

Type of the Transformation parameters. This is the same type used to represent the search space of the optimization algorithm.

Reimplemented from itk::MultiResolutionImageRegistrationMethodWithFeatures< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >.

Definition at line 123 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
typedef SmartPointer<Self> elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Pointer

Standard ITK: Self

Reimplemented from elastix::RegistrationBase< TElastix >.

Definition at line 63 of file elxMultiResolutionRegistrationWithFeatures.h.

Definition at line 67 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
typedef RegistrationBase<TElastix> elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Superclass2

Definition at line 68 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
typedef TimerType::Pointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::TimerPointer [protected]
template<class TElastix >
typedef tmr::Timer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::TimerType [protected]

Typedef's for timer.

Definition at line 165 of file elxMultiResolutionRegistrationWithFeatures.h.


Constructor & Destructor Documentation

template<class TElastix >
elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MultiResolutionRegistrationWithFeatures ( ) [inline, protected]

The constructor.

Definition at line 162 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
virtual elastix::MultiResolutionRegistrationWithFeatures< TElastix >::~MultiResolutionRegistrationWithFeatures ( ) [inline, protected, virtual]

The destructor.

Definition at line 165 of file elxMultiResolutionRegistrationWithFeatures.h.

template<class TElastix >
elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MultiResolutionRegistrationWithFeatures ( const Self ) [private]

The private constructor.


Member Function Documentation

template<class TElastix >
virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::BeforeEachResolution ( void  ) [virtual]

Execute stuff before each resolution:

  • Update masks with an erosion.
  • Set the metric weights.

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::BeforeRegistration ( void  ) [virtual]

Execute stuff before the actual registration:

  • Connect all components to the registration framework.
  • Set the number of resolution levels.
  • Set the fixed image regions.
  • Add the sub metric columns to the iteration info object.

Reimplemented from elastix::BaseComponent.

template<class TElastix >
elastix::MultiResolutionRegistrationWithFeatures< TElastix >::elxClassNameMacro ( "MultiResolutionRegistrationWithFeatures< TElastix >"  )

Name of this class. Use this name in the parameter file to select this specific registration framework.
example: (Registration "MultiResolutionRegistrationWithFeatures")

template<class TElastix >
virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetComponents ( void  ) [protected, virtual]

Read the components from m_Elastix and set them in the Registration class.

template<class TElastix >
virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetFixedImageInterpolators ( void  ) [protected, virtual]

Create and set the fixed image interpolators.

template<class TElastix >
virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetFixedImageRegions ( void  ) [protected, virtual]

Set the fixed image regions.

template<class TElastix >
virtual const char* elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetClassName ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from elastix::RegistrationBase< TElastix >.

template<class TElastix >
elastix::MultiResolutionRegistrationWithFeatures< TElastix >::itkStaticConstMacro ( FixedImageDimension  ,
unsigned  int,
Superclass2::FixedImageDimension   
)

Get the dimension of the fixed image.

template<class TElastix >
elastix::MultiResolutionRegistrationWithFeatures< TElastix >::itkStaticConstMacro ( MovingImageDimension  ,
unsigned  int,
Superclass2::MovingImageDimension   
)

Get the dimension of the moving image.

template<class TElastix >
static Pointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::New ( ) [static]
template<class TElastix >
void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::operator= ( const Self ) [private]

The private copy constructor.

template<class TElastix >
void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::UpdateFixedMasks ( unsigned int  level) [protected]

Function to update masks.

template<class TElastix >
void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::UpdateMovingMasks ( unsigned int  level) [protected]


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