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elastix::AdvancedKappaStatisticMetric< TElastix > Class Template Reference

#include <elxAdvancedKappaStatisticMetric.h>

Inheritance diagram for elastix::AdvancedKappaStatisticMetric< TElastix >:
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Public Types

typedef
Superclass2::ConfigurationPointer 
ConfigurationPointer
typedef
Superclass2::ConfigurationType 
ConfigurationType
typedef SmartPointer< const SelfConstPointer
typedef
Superclass1::CoordinateRepresentationType 
CoordinateRepresentationType
typedef Superclass1::DerivativeType DerivativeType
typedef Superclass2::ElastixPointer ElastixPointer
typedef Superclass2::ElastixType ElastixType
typedef
Superclass1::FixedImageConstPointer 
FixedImageConstPointer
typedef
Superclass1::FixedImageLimiterOutputType 
FixedImageLimiterOutputType
typedef
Superclass1::FixedImageLimiterType 
FixedImageLimiterType
typedef
Superclass1::FixedImageMaskPointer 
FixedImageMaskPointer
typedef
Superclass1::FixedImageMaskType 
FixedImageMaskType
typedef
Superclass1::FixedImagePixelType 
FixedImagePixelType
typedef
Superclass1::FixedImageRegionType 
FixedImageRegionType
typedef Superclass1::FixedImageType FixedImageType
typedef
Superclass1::GradientImageFilterPointer 
GradientImageFilterPointer
typedef
Superclass1::GradientImageFilterType 
GradientImageFilterType
typedef
Superclass1::GradientImagePointer 
GradientImagePointer
typedef
Superclass1::GradientImageType 
GradientImageType
typedef
Superclass1::GradientPixelType 
GradientPixelType
typedef
Superclass1::ImageSampleContainerPointer 
ImageSampleContainerPointer
typedef
Superclass1::ImageSampleContainerType 
ImageSampleContainerType
typedef
Superclass1::ImageSamplerPointer 
ImageSamplerPointer
typedef
Superclass1::ImageSamplerType 
ImageSamplerType
typedef Superclass1::InputPointType InputPointType
typedef
Superclass1::InterpolatorPointer 
InterpolatorPointer
typedef
Superclass1::InterpolatorType 
InterpolatorType
typedef Superclass2::ITKBaseType ITKBaseType
typedef Superclass1::MeasureType MeasureType
typedef
Superclass1::MovingImageConstPointer 
MovingImageConstPointer
typedef
Superclass1::MovingImageDerivativeScalesType 
MovingImageDerivativeScalesType
typedef
Superclass1::MovingImageLimiterOutputType 
MovingImageLimiterOutputType
typedef
Superclass1::MovingImageLimiterType 
MovingImageLimiterType
typedef
Superclass1::MovingImageMaskPointer 
MovingImageMaskPointer
typedef
Superclass1::MovingImageMaskType 
MovingImageMaskType
typedef
Superclass1::MovingImagePixelType 
MovingImagePixelType
typedef
Superclass1::MovingImageRegionType 
MovingImageRegionType
typedef
Superclass1::MovingImageType 
MovingImageType
typedef
Superclass1::OutputPointType 
OutputPointType
typedef Superclass1::ParametersType ParametersType
typedef SmartPointer< SelfPointer
typedef Superclass1::RealType RealType
typedef
Superclass2::RegistrationPointer 
RegistrationPointer
typedef
Superclass2::RegistrationType 
RegistrationType
typedef
AdvancedKappaStatisticMetric 
Self
typedef
AdvancedKappaStatisticImageToImageMetric
< typename MetricBase
< TElastix >::FixedImageType,
typename MetricBase< TElastix >
::MovingImageType
Superclass1
typedef MetricBase< TElastix > Superclass2
typedef TimerType::Pointer TimerPointer
typedef tmr::Timer TimerType
typedef
Superclass1::TransformJacobianType 
TransformJacobianType
typedef
Superclass1::TransformParametersType 
TransformParametersType
typedef
Superclass1::TransformPointer 
TransformPointer
typedef Superclass1::TransformType TransformType

Public Member Functions

virtual void BeforeEachResolution (void)
virtual void BeforeRegistration (void)
 elxClassNameMacro ("AdvancedKappaStatistic")
virtual const char * GetClassName () const
virtual void Initialize (void) throw (ExceptionObject)
 itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
 itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

Static Public Member Functions

static Pointer New ()

Protected Member Functions

 AdvancedKappaStatisticMetric ()
virtual ~AdvancedKappaStatisticMetric ()

Private Member Functions

 AdvancedKappaStatisticMetric (const Self &)
void operator= (const Self &)

Detailed Description

template<class TElastix>
class elastix::AdvancedKappaStatisticMetric< TElastix >

An metric based on the itk::AdvancedKappaStatisticImageToImageMetric.

The parameters used in this class are:

Parameters:
Metric: Select this metric as follows:
(Metric "AdvancedKappaStatistic")
Parameters:
UseComplement: Bool to use the complement of the metric or not.
If true, the 1 - KappaStatistic is returned, which is useful since most optimizers search by default for a minimum.
(UseComplement "true")
The default value is true.
Parameters:
ForeGroundvalue: the overlap of structures with this value is calculated.
(ForeGroundvalue 3.5)
The default value is 1.0.

Definition at line 48 of file elxAdvancedKappaStatisticMetric.h.


Member Typedef Documentation

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 136 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 135 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef SmartPointer<const Self> elastix::AdvancedKappaStatisticMetric< TElastix >::ConstPointer

Typedefs from the superclass.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 80 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 134 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef Superclass2::ElastixType elastix::AdvancedKappaStatisticMetric< TElastix >::ElastixType

Typedef's inherited from Elastix.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 133 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 84 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef Superclass2::ITKBaseType elastix::AdvancedKappaStatisticMetric< TElastix >::ITKBaseType

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 139 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef Superclass1::MeasureType elastix::AdvancedKappaStatisticMetric< TElastix >::MeasureType

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 105 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 81 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 107 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef SmartPointer<Self> elastix::AdvancedKappaStatisticMetric< TElastix >::Pointer
template<class TElastix >
typedef Superclass1::RealType elastix::AdvancedKappaStatisticMetric< TElastix >::RealType

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 138 of file elxAdvancedKappaStatisticMetric.h.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 137 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef AdvancedKappaStatisticMetric elastix::AdvancedKappaStatisticMetric< TElastix >::Self

Standard ITK-stuff.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 58 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef AdvancedKappaStatisticImageToImageMetric< typename MetricBase<TElastix>::FixedImageType, typename MetricBase<TElastix>::MovingImageType > elastix::AdvancedKappaStatisticMetric< TElastix >::Superclass1

Definition at line 61 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef MetricBase<TElastix> elastix::AdvancedKappaStatisticMetric< TElastix >::Superclass2

Definition at line 62 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef TimerType::Pointer elastix::AdvancedKappaStatisticMetric< TElastix >::TimerPointer

Typedef for timer.

Definition at line 144 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef tmr::Timer elastix::AdvancedKappaStatisticMetric< TElastix >::TimerType

Typedef for timer.

Definition at line 142 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
typedef Superclass1::TransformType elastix::AdvancedKappaStatisticMetric< TElastix >::TransformType

Constructor & Destructor Documentation

template<class TElastix >
elastix::AdvancedKappaStatisticMetric< TElastix >::AdvancedKappaStatisticMetric ( ) [inline, protected]

The constructor.

Definition at line 167 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
virtual elastix::AdvancedKappaStatisticMetric< TElastix >::~AdvancedKappaStatisticMetric ( ) [inline, protected, virtual]

The destructor.

Definition at line 169 of file elxAdvancedKappaStatisticMetric.h.

template<class TElastix >
elastix::AdvancedKappaStatisticMetric< TElastix >::AdvancedKappaStatisticMetric ( const Self ) [private]

The private constructor.


Member Function Documentation

template<class TElastix >
virtual void elastix::AdvancedKappaStatisticMetric< TElastix >::BeforeEachResolution ( void  ) [virtual]

Do some things before each resolution:

  • Set the CheckNumberOfSamples setting

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::AdvancedKappaStatisticMetric< TElastix >::BeforeRegistration ( void  ) [virtual]

Do some things before registration:

  • Set the UseComplement setting
  • Set the ForeGroundvalue setting

Reimplemented from elastix::BaseComponent.

template<class TElastix >
elastix::AdvancedKappaStatisticMetric< TElastix >::elxClassNameMacro ( "AdvancedKappaStatistic"  )

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "AdvancedKappaStatistic")

template<class TElastix >
virtual const char* elastix::AdvancedKappaStatisticMetric< TElastix >::GetClassName ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

template<class TElastix >
virtual void elastix::AdvancedKappaStatisticMetric< TElastix >::Initialize ( void  ) throw (ExceptionObject) [virtual]

Sets up a timer to measure the initialisation time and calls the Superclass' implementation.

Reimplemented from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >.

template<class TElastix >
elastix::AdvancedKappaStatisticMetric< TElastix >::itkStaticConstMacro ( FixedImageDimension  ,
unsigned  int,
FixedImageType::ImageDimension   
)

The fixed image dimension.

Reimplemented from elastix::MetricBase< TElastix >.

template<class TElastix >
elastix::AdvancedKappaStatisticMetric< TElastix >::itkStaticConstMacro ( MovingImageDimension  ,
unsigned  int,
MovingImageType::ImageDimension   
)

The moving image dimension.

Reimplemented from elastix::MetricBase< TElastix >.

template<class TElastix >
static Pointer elastix::AdvancedKappaStatisticMetric< TElastix >::New ( ) [static]
template<class TElastix >
void elastix::AdvancedKappaStatisticMetric< TElastix >::operator= ( const Self ) [private]

The private copy constructor.



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