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FeatureFinderRaw

Identifies peptide features in raw (i.e. profile) LC-MS data.

pot. predecessor tools $ \longrightarrow $ FeatureFinderRaw $ \longrightarrow $ pot. successor tools
FileConverter IDMapper
FileFilter

FeatureFinderRaw is a tool for the identification of peptide features in profile LC-MS data.

Algorithm

The underlying algorithm of the tool is equivalent to that of SILACAnalyzer.

The command line parameters of this tool are:

Parameter Tuning

input:

standard output:

optional output:

The results of an analysis can easily visualized within TOPPView. Simply load *.consensusXML and *.featureXML as layers over the original *.mzML.

Parameters in section algorithm:


OpenMS / TOPP release 1.9.0 Documentation generated on Tue May 28 2013 12:41:58 using doxygen 1.8.3.1