Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Macros Groups Pages
Digestor

Digests a protein database in-silico.

pot. predecessor tools $ \longrightarrow $ Digestor $ \longrightarrow $ pot. successor tools
none (FASTA input) IDFilter (peptide blacklist)

This application is used to digest a protein database to get all peptides given a cleavage enzyme. At the moment only trypsin is supported.

The output can be used as a blacklist filter input to IDFilter, to remove certain peptides.

The command line parameters of this tool are:

 

OpenMS / TOPP release 1.9.0 Documentation generated on Tue May 28 2013 12:41:58 using doxygen 1.8.3.1