Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Macros Groups Pages
IdXMLEvaluation

Application that evaluates tps, tns, fps, and fns for an IdXML file with predicted RTs.

The method needs an IdXML file with IDs and predicted RTs. The second input file is a file containing the protein sequences which are considered as positive hits. This tool then evaluates the tps, fps, tns, and fns for the unfiltered IDs, for the IDs filtered in first RT dimension, for the IDs filtered in the second RT dimension as well as for the IDs filtered in both dimensions. The output is a table with either csv format (can be imported by excel) or latex format (to include in tables in you latex manuscripts).

The command line parameters of this tool are:

 

OpenMS / TOPP release 1.9.0 Documentation generated on Sun Oct 27 2013 01:11:37 using doxygen 1.8.4