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PILISModelCV

Perform a cross validation of the PILIS model parameters

Experimental classes:
This TOPP-tool is not well tested and not all features might be properly implemented and tested!
pot. predecessor tools $ \longrightarrow $ PILISModelCV $ \longrightarrow $ pot. successor tools
MascotAdapter (or other ID engines) PILISIdentification
PILISModelTrainer

A cross validation is performed to find the best parameters. The ini file contains for each parameter that can be optimized a flag, whether it should be used, a min value, a max value and a step size. These parameters are used to perform a grid search on the parameter. The result is a model with best performing parameter set. More on the cross validation can be found at the docu of the PILISCrossValidation class.

The command line parameters of this tool are:

 

OpenMS / TOPP release 1.9.0 Documentation generated on Sun Oct 27 2013 01:11:36 using doxygen 1.8.4