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7
8
9 """MultiVariate Pattern Analysis -- load helper
10
11 If you don't like to specify exact location of any particular
12 functionality within PyMVPA, please simply::
13
14 from mvpa.suite import *
15
16 or
17
18 import mvpa.suite
19
20 """
21
22 __docformat__ = 'restructuredtext'
23
24
25 from mvpa import *
26
27 from mvpa.base import *
28 from mvpa.base.config import *
29 from mvpa.base.verbosity import *
30 from mvpa.base.info import *
31
32 if externals.exists('reportlab'):
33 from mvpa.base.report import *
34 else:
35 from mvpa.base.report_dummy import Report
36
37
38 from mvpa.algorithms.cvtranserror import *
39
40 from mvpa import clfs
41 from mvpa.clfs.distance import *
42 from mvpa.clfs.kernel import *
43 from mvpa.clfs.base import *
44 from mvpa.clfs.meta import *
45 from mvpa.clfs.knn import *
46 if externals.exists('lars'):
47 from mvpa.clfs.lars import *
48 if externals.exists('elasticnet'):
49 from mvpa.clfs.enet import *
50 if externals.exists('glmnet'):
51 from mvpa.clfs.glmnet import *
52 from mvpa.clfs.smlr import *
53 from mvpa.clfs.blr import *
54 from mvpa.clfs.stats import *
55 if externals.exists('libsvm') or externals.exists('shogun'):
56 from mvpa.clfs.svm import *
57 from mvpa.clfs.transerror import *
58 from mvpa.clfs.warehouse import *
59
60 from mvpa import datasets
61 from mvpa.datasets import *
62
63 from mvpa.datasets.base import *
64 from mvpa.datasets.meta import *
65 from mvpa.datasets.masked import *
66 from mvpa.datasets.miscfx import *
67 from mvpa.datasets.channel import *
68 from mvpa.datasets.event import *
69 from mvpa.datasets.eep import *
70 if externals.exists('nifti'):
71 from mvpa.datasets.nifti import *
72
73 from mvpa.datasets import splitters
74 from mvpa.datasets.splitters import *
75
76 from mvpa import featsel
77 from mvpa.featsel.base import *
78 from mvpa.featsel.helpers import *
79 from mvpa.featsel.ifs import *
80 from mvpa.featsel.rfe import *
81
82 from mvpa import mappers
83
84 from mvpa.mappers.base import *
85 from mvpa.mappers.metric import *
86 from mvpa.mappers.mask import *
87 from mvpa.mappers.svd import *
88 from mvpa.mappers.procrustean import *
89 from mvpa.mappers.boxcar import *
90 from mvpa.mappers.samplegroup import *
91 from mvpa.mappers.som import *
92 from mvpa.mappers.array import *
93 if externals.exists('scipy'):
94 from mvpa.mappers.zscore import ZScoreMapper
95 if externals.exists('mdp'):
96 from mvpa.mappers.pca import *
97 from mvpa.mappers.ica import *
98 if externals.exists('mdp ge 2.4'):
99 from mvpa.mappers.lle import *
100
101 from mvpa import measures
102 from mvpa.measures.anova import *
103 from mvpa.measures.glm import *
104 from mvpa.measures.irelief import *
105 from mvpa.measures.base import *
106 from mvpa.measures.noiseperturbation import *
107 from mvpa.measures.searchlight import *
108 from mvpa.measures.splitmeasure import *
109 from mvpa.measures.corrstability import *
110
111 from mvpa.support.copy import *
112 from mvpa.misc.fx import *
113 from mvpa.misc.errorfx import *
114 from mvpa.misc.cmdline import *
115 from mvpa.misc.data_generators import *
116 from mvpa.misc.exceptions import *
117 from mvpa.misc import *
118 from mvpa.misc.io import *
119 from mvpa.misc.io.eepbin import *
120 from mvpa.misc.io.meg import *
121 if externals.exists('cPickle') and externals.exists('gzip'):
122 from mvpa.misc.io.hamster import *
123 from mvpa.misc.fsl import *
124 from mvpa.misc.bv import *
125 from mvpa.misc.bv.base import *
126 from mvpa.misc.param import *
127 from mvpa.misc.state import *
128 from mvpa.misc.support import *
129 from mvpa.misc.transformers import *
130
131 if externals.exists("nifti"):
132 from mvpa.misc.fsl.melodic import *
133
134 if externals.exists("pylab"):
135 from mvpa.misc.plot import *
136 from mvpa.misc.plot.erp import *
137 if externals.exists(['griddata', 'scipy']):
138 from mvpa.misc.plot.topo import *
139 if externals.exists('nifti'):
140 from mvpa.misc.plot.mri import plotMRI
141
142 if externals.exists("scipy"):
143 from mvpa.support.stats import scipy
144 from mvpa.measures.corrcoef import *
145 from mvpa.measures.ds import *
146 from mvpa.clfs.ridge import *
147 from mvpa.clfs.plr import *
148 from mvpa.misc.stats import *
149 from mvpa.clfs.gpr import *
150
151 if externals.exists("pywt"):
152 from mvpa.mappers.wavelet import *
153
154 if externals.exists("pylab"):
155 import pylab as P
156
157 if externals.exists("lxml") and externals.exists("nifti"):
158 from mvpa.atlases import *
159